Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901010.1_cds_XP_016451020.1_45411
CDS Infomation

[gene=LOC107775762] [db_xref=GeneID:107775762] [protein=polygalacturonase-like] [protein_id=XP_016451020.1] [location=join(84658..85092,85703..85992,87071..87296,87434..87661)] [gbkey=CDS]
Sequence

ATGGCCAACTTCAAAACTATGACATGTACCGGTGTTTCTTTGTTGCTCTTCTTGTGTTTA
ATACCTTCTTGTTTAGCCTACAATGTGGTTAGTTTTGGGGCTAGGGGAGATGGGAGGACA
GACTCAACCTCCGCATTTCTTCGCGCTTGGTCTGCTGCCTGCCACTCTACTAGCCAGGCC
AACGTGTACATTCCACGGGGAACCTATTTGGTAAGAACGTTGAATTTAAACGGCCCTTGT
CGGAGAAGAATTGAGTTCCGAATTGACGGTACTCTCATTGCTCCGGCCAATTATCACGCA
ATTGGTCATTCTGAGTTCTGGATTATGTTTTATAAGGTAAGTGGGCTTTCAGTGTATGGA
GGAACTATGAACGCCAAGGGTCATGGTTATTGGTCGTGCCGAAAGGGTGGAAAGTCTTGC
CCACAAGGAGCTAGGTCAATACAATTTATGTGGTGTAACAATGTAGTGTTGAGGGGCTTA
ACATCACTCCACAGTCAAAGAGTACATGTGGGGATAGGTTACAGCAGCAATGTGAGAATT
GAGAATGTGAAGATAATAGCCCCAAGTGGAAGCCCAAATACTGATGGCATTCATGTACAA
AACTCAAGAGGGGTTACCATTTACGGCAGCATCATCCAGACTGGAGATGACTGCATTTCC
GTTGGCCCTGGCTCCATGAACTTGTGGATTGAAAAAATTGGATGTGGACCTGGACATGGC
ATCAGCATAGGAAGTTTGGGGAGTAGTTACAACGAAGCTGGAGTTGCGAATATAACAGTA
ACAAATTCGGTTTTCACGAAGACACAGAATGGCGTTAGAGTAAAGTCCTGGGCAAGACCA
AGTGGTGGCTATGCTAAAAATCTCATGTTCTCAAATCTTATTATGAAGAATGTTGGGTAC
CCCATAATCATTGACCAAAACTATTGTCCCGATAATAGTTGCCCTCATCAGAATTCAGGA
GTAAAGGTGAGTCAAGTAACATACAAGAATGTGAAAGGGACATCATCCACACAGGCAGCC
ATGAAATTTGATTGCAGCTACACAAATCCATGCACTGGAATCAGACTGCAAGACATAAAG
CTTACTCACAATGATCGCTTAAGAAGGCCTGCAATATCCTACTGTAGAAATGCAAGTGGA
AGACGTGGTGGCACAGTCACTCCCAGGAGTTGCTTCTAA

Peptide Sequence

PEP ID

XP_016451020.1
PEP Infomation

PREDICTED: polygalacturonase-like [Nicotiana tabacum]
Sequence

MANFKTMTCTGVSLLLFLCLIPSCLAYNVVSFGARGDGRTDSTSAFLRAWSAACHSTSQA
NVYIPRGTYLVRTLNLNGPCRRRIEFRIDGTLIAPANYHAIGHSEFWIMFYKVSGLSVYG
GTMNAKGHGYWSCRKGGKSCPQGARSIQFMWCNNVVLRGLTSLHSQRVHVGIGYSSNVRI
ENVKIIAPSGSPNTDGIHVQNSRGVTIYGSIIQTGDDCISVGPGSMNLWIEKIGCGPGHG
ISIGSLGSSYNEAGVANITVTNSVFTKTQNGVRVKSWARPSGGYAKNLMFSNLIMKNVGY
PIIIDQNYCPDNSCPHQNSGVKVSQVTYKNVKGTSSTQAAMKFDCSYTNPCTGIRLQDIK
LTHNDRLRRPAISYCRNASGRRGGTVTPRSCF

Transcript Sequence

Gene sequence data has not been registered.